4AC4

CRYSTAL STRUCTURE OF TRANSTHYRETIN IN COMPLEX WITH LIGAND C-18

Structural Biology Knowledgebase: 4AC4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.219

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4AC4

Classification: TRANSPORT PROTEIN

Total Structure Weight: 28043.47

Macromolecule Entities
Molecule Chains Length Organism Details
TRANSTHYRETIN A, B 127 Homo sapiens Gene Name(s): TTR Gene View PALB

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HKA
Query on HKA

A, B 3-METHOXY-4-PHENOXYBENZOIC ACID
C14 H12 O4
BHLHNTNYVDUKFV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
HKA IC50: 41000 nM (100) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.219
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 85.33 α = 90.00
b = 42.86 β = 90.00
c = 64.28 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-12-13
  • Released Date: 2012-12-26
  • Deposition author(s): Tomar, D., Khan, T., Singh, R.R., Mishra, S., Gupta, S., Surolia, A., Salunke, D.M.

Revision History

  • 2015-04-01
    Type: Citation | Details: JRNL
  • 2014-10-29
    Type: Citation | Details: JRNL