3TXA

Structural Analysis of Adhesive Tip pilin, GBS104 from Group B Streptococcus agalactiae

Structural Biology Knowledgebase: 3TXA SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.62 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.206

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3TXA

Classification: CELL ADHESION

Total Structure Weight: 77177.63

Macromolecule Entities
Molecule Chains Length Organism Details
Cell wall surface anchor family protein A 682 Streptococcus agalactiae Fragment: N2 and N3 domains (UNP residues 48-729)
Gene Name(s): SAG0649
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CD
Query on CD

A CADMIUM ION
Cd
WLZRMCYVCSSEQC-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
LI
Query on LI

A LITHIUM ION
Li
HBBGRARXTFLTSG-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.62 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.206
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 124.58 α = 90.00
b = 124.58 β = 90.00
c = 117.84 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-09-23
  • Released Date: 2013-03-27
  • Deposition author(s): Krishnan, V., Narayana, S.V.L.

Revision History

  • 2013-06-19
    Type: Citation | Details: Citation update
  • 2013-05-29
    Type: Citation | Details: Citation update