2WFY

TRUNCATION AND OPTIMISATION OF PEPTIDE INHIBITORS OF CDK2, CYCLIN A THROUGH STRUCTURE GUIDED DESIGN

Structural Biology Knowledgebase: 2WFY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.53 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.193

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2WFY

Classification: TRANSFERASE

Total Structure Weight: 128950.72

Macromolecule Entities
Molecule Chains Length Organism Details
CELL DIVISION PROTEIN KINASE 2 A, C 298 Homo sapiens EC#: 2.7.11.22 IUBMB
Gene Name(s): CDK2 Gene View CDKN2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
CYCLIN-A2 B, D 260 Homo sapiens Fragment: RESIDUES 173-432
Gene Name(s): CCNA2 Gene View CCN1 CCNA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
ARG-ARG-B3L-PHE E, F 6 synthetic

Small Molecules
Modified Residues 3 Unique
ID Chains Type Formula 2D Diagram Parent
ACE
Query on ACE
E, F NON-POLYMER C2 H4 O --
B3L
Query on B3L
E, F L-peptide linking C7 H15 N O2 --
NH2
Query on NH2
E, F NON-POLYMER H2 N --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.53 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.193
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 74.62 α = 90.00
b = 115.81 β = 90.00
c = 157.91 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-04-15
  • Released Date: 2009-06-09
  • Deposition author(s): Kontopidis, G., Andrews, M.J., Mcinnes, C., Plater, A., Innes, L., Renachowski, S., Cowan, A., Fischer, P.M.

Revision History

  • 2011-10-12
    Type: Citation | Details: JRNL
  • 2011-10-12
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2011-10-12
    Type: Version format compliance | Details: REMARK 4
  • 2011-10-12
    Type: Non-polymer description | Details: FORMUL,HETSYN
  • 2011-10-12
    Type: Other | Details: REMARK 525
  • 2011-10-12
    Type: Geometry validation | Details: REMARK 500