2JJC

Hsp90 alpha ATPase domain with bound small molecule fragment


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.178

Literature

Macromolecules
Sequence Display for 2JJC

Classification: CHAPERONE

Total Structure Weight: 24579.80

Macromolecule Entities
Molecule Chains Length Organism Details
HEAT SHOCK PROTEIN HSP 90-ALPHA A 218 Homo sapiens Fragment: N-TERMINAL ATPASE DOMAIN, RESIDUES 9-15,17-223
Gene Name(s): HSP90AA1 Gene View HSP90A HSPC1 HSPCA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
LGA
Query on LGA

A PYRIMIDIN-2-AMINE
C4 H5 N3
LJXQPZWIHJMPQQ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
DMS
Query on DMS

A DIMETHYL SULFOXIDE
C2 H6 O S
IAZDPXIOMUYVGZ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
LGA Kd: 19000000 nM (99) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.178
  • Space Group: I 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 65.27 α = 90.00
b = 89.02 β = 90.00
c = 99.53 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-03-31
  • Released Date: 2008-07-15
  • Deposition author(s): Congreve, M., Chessari, G., Tisi, D., Woodhead, A.J.

Revision History

  • 2011-05-07
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance
  • 2017-07-05
    Type: Data collection