1ZX4

Structure of ParB bound to DNA

Structural Biology Knowledgebase: 1ZX4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.98 Å
  • R-Value Free: 0.296
  • R-Value Work: 0.248

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1ZX4

Classification: TRANSLATION

Total Structure Weight: 60167.88


Macromolecule Entities
Molecule Chains Length Organism Details
Plasmid Partition par B protein A, B 192 Enterobacteria phage p1 Fragment: P1 ParB
Mutation: M159M, M161M, M166M, M220M, D245N, M247M, M318M
Gene Name(s): parB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
parS-small DNA centromere site T 25 synthetic W-strand
parS-small DNA centromere site S 25 synthetic C-strand

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CIT
Query on CIT

A CITRIC ACID
C6 H8 O7
KRKNYBCHXYNGOX-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.98 Å
  • R-Value Free: 0.296
  • R-Value Work: 0.248
  • Space Group: P 62 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 154.60 α = 90.00
b = 154.60 β = 90.00
c = 132.30 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-06-06
  • Released Date: 2005-11-29
  • Deposition author(s): Schumacher, M.A., Funnell, B.E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4