1FAV

THE STRUCTURE OF AN HIV-1 SPECIFIC CELL ENTRY INHIBITOR IN COMPLEX WITH THE HIV-1 GP41 TRIMERIC CORE

Structural Biology Knowledgebase: 1FAV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.295
  • R-Value Work: 0.240

Literature

Macromolecules
Sequence Display for 1FAV

Classification: Viral protein

Total Structure Weight: 13318.26

Macromolecule Entities
Molecule Chains Length Organism Details
HIV-1 ENVELOPE PROTEIN CHIMERA A 79 Human immunodeficiency virus 1 Mutation: L2I, V6I, L9I, N13I, L16I, V20I, L23I, V27I
Details: CHIMERA CONSISTS OF A FRAGMENT OF GCN4 ZIPPER CLONED N-TERMINAL TO A FRAGMENT OF GP41
Gene Name(s): GCN4 AAS3 ARG9 YEL009C env
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
PROTEIN (TRANSMEMBRANE GLYCOPROTEIN) C 33 Human immunodeficiency virus 1 Fragment: OUTER PEPTIDE OF GP41 OF HIV-1
Gene Name(s): env

Small Molecules
Modified Residues 3 Unique
ID Chains Type Formula 2D Diagram Parent
3PA
Query on 3PA
C NON-POLYMER C8 H14 O2 --
GGL
Query on GGL
C L-gamma-peptide, C-delta linking C5 H9 N O4 --
4BA
Query on 4BA
C NON-POLYMER C11 H13 N O4 --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.295
  • R-Value Work: 0.240
  • Space Group: P 3 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 35.82 α = 90.00
b = 35.82 β = 90.00
c = 164.69 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-07-13
  • Released Date: 2000-08-23
  • Deposition author(s): Zhou, G., Ferrer, M., Chopra, R., Strassmaier, T., Weissenhorn, W., Skehel, J.J., Oprian, D., Schreiber, S.L., Harrison, S.C., Wiley, D.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values