5LDV

Crystal Structures of MOMP from Campylobacter jejuni


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.222
  • R-Value Work: 0.193

Literature

Macromolecules
Sequence Display for 5LDV

Classification: MEMBRANE PROTEIN

Total Structure Weight: 44881.47

Macromolecule Entities
Molecule Chains Length Organism Details
MOMP porin A 408 Campylobacter jejuni Mutation: T4G
Gene Name(s): momp
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: BETA-BARREL

Subgroup Name: Beta-Barrel Membrane Proteins: Porins and Relatives

Protein Name: MOMP major outer membrane protein


Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
1PE
Query on 1PE

A PENTAETHYLENE GLYCOL
PEG400 (Synonym)
C10 H22 O6
JLFNLZLINWHATN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
OCT
Query on OCT

A N-OCTANE
C8 H18
TVMXDCGIABBOFY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.222
  • R-Value Work: 0.193
  • Space Group: P 63

Unit Cell:

Length (Å) Angle (°)
a = 90.63 α = 90.00
b = 90.63 β = 90.00
c = 104.40 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-06-28
  • Released Date: 2016-10-26
  • Deposition author(s): Wallat, G.D., Ferrara, L.M.G., Moynie, L., Naismith, J.H.

Revision History

  • 2016-11-09
    Type: Citation | Details: Citation