5EFR

Crystal Structure of a BamA-BamD fusion

Structural Biology Knowledgebase: 5EFR SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.211

Literature

Macromolecules
Sequence Display for 5EFR

Classification: CELL ADHESION

Total Structure Weight: 51254.89

Macromolecule Entities
Molecule Chains Length Organism Details
BamA-BamD fusion Protein A 446 Rhodothermus marinus Details: sequence mismatches to alanine are not mutations. They are unmodeled side chains.
Gene Name(s): Rhom172_0906 Rhom172_2204
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: BETA-BARREL

Subgroup Name: Omp85-TpsB Outer Membrane Transporter Superfamily

Protein Name: BamA-POTRA4-5-BamD fusion complex of the Bam β-barrel assembly machine



Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.211
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 69.91 α = 90.00
b = 48.06 β = 104.31
c = 78.03 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-10-24
  • Released Date: 2016-01-27
  • Deposition author(s): Bergal, H.T., Hopkins, A.H., Metzner, S.I., Sousa, M.C.

Revision History

  • 2016-02-10
    Type: Citation | Details: Citation