4KZZ

Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A

Structural Biology Knowledgebase: 4KZZ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 7.03 Å
  • R-Value Free: 0.359
  • R-Value Work: 0.345

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4KZZ

Classification: ribosome

Total Structure Weight: 1274255.38


Macromolecule Entities
Molecule Chains Length Organism Details
40S Ribosomal Protein SA A 295 Oryctolagus cuniculus Gene Name(s):
40S Ribosomal Protein S3A B 264 Oryctolagus cuniculus Gene Name(s): LOC100340708 RPS3A Gene View
40S Ribosomal Protein S2 C 278 Oryctolagus cuniculus Gene Name(s):
40S Ribosomal Protein S3 D 243 Oryctolagus cuniculus Gene Name(s):
40S Ribosomal Protein S4X E 263 Oryctolagus cuniculus Gene Name(s): RPS4X Gene View
40S Ribosomal Protein S5 F 204 Oryctolagus cuniculus Gene Name(s): RPS5 Gene View
40S Ribosomal Protein S6 G 249 Oryctolagus cuniculus Gene Name(s): LOC100339133
40S Ribosomal Protein S7 H 194 Oryctolagus cuniculus Gene Name(s): RPS7 Gene View
40S Ribosomal Protein S8 I 208 Oryctolagus cuniculus Gene Name(s): RPS8 Gene View
40S Ribosomal Protein S9 J 194 Oryctolagus cuniculus Gene Name(s): RPS9 Gene View
40S Ribosomal Protein S10 K 165 Oryctolagus cuniculus Gene Name(s):
40S Ribosomal Protein S11 L 158 Oryctolagus cuniculus Gene Name(s): RPS11 Gene View
40S Ribosomal Protein S12 M 132 Oryctolagus cuniculus Gene Name(s): RPS12 Gene View
40S Ribosomal Protein S13 N 151 Oryctolagus cuniculus Gene Name(s): RPS13 Gene View
40S Ribosomal Protein S14 O 151 Oryctolagus cuniculus Gene Name(s): LOC100337691
40S Ribosomal Protein S15 P 145 Oryctolagus cuniculus Gene Name(s): LOC103349305
40S Ribosomal Protein S16 Q 146 Oryctolagus cuniculus Gene Name(s): RPS16 Gene View
40S Ribosomal Protein S17 R 135 Oryctolagus cuniculus Gene Name(s): RPS17 Gene View
40S Ribosomal Protein S18 S 152 Oryctolagus cuniculus Gene Name(s): RPS18 Gene View
40S Ribosomal Protein S19 T 145 Oryctolagus cuniculus Gene Name(s): RPS19 Gene View
40S Ribosomal Protein S20 U 119 Oryctolagus cuniculus Gene Name(s): LOC100354063
40S Ribosomal Protein S21 V 83 Oryctolagus cuniculus Gene Name(s): RPS21 Gene View
40S Ribosomal Protein S15A W 130 Oryctolagus cuniculus Gene Name(s): RPS15A Gene View
40S Ribosomal Protein S23 X 143 Oryctolagus cuniculus Mutation: A1M
Gene Name(s): RPS23 Gene View
40S Ribosomal Protein S24 Y 133 Oryctolagus cuniculus Gene Name(s): RPS24 Gene View
40S Ribosomal Protein S25 Z 125 Oryctolagus cuniculus Gene Name(s): RPS25 Gene View
40S Ribosomal Protein S26 a 115 Oryctolagus cuniculus Gene Name(s): RPS26 Gene View
40S Ribosomal Protein S27 b 84 Oryctolagus cuniculus Gene Name(s): RPS27 Gene View
40S Ribosomal Protein S28 c 69 Oryctolagus cuniculus Gene Name(s): RPS28 Gene View
40S Ribosomal Protein S29 d 56 Oryctolagus cuniculus Gene Name(s): LOC100337712
40S Ribosomal Protein S30 e 133 Oryctolagus cuniculus Gene Name(s): FAU Gene View
40S Ribosomal Protein S27A f 156 Oryctolagus cuniculus Gene Name(s): RPS27A Gene View
40S Ribosomal Protein RACK1 g 317 Oryctolagus cuniculus Gene Name(s): GNB2L1
human initiation factor eIF1A n 144 Homo sapiens Gene Name(s): EIF1AX Gene View EIF1A EIF4C
Macromolecule Entities
Molecule Chains Length Organism Details
18S Ribosomal RNA i 1863 Oryctolagus cuniculus
initiator Met-RNA-i j 75 Homo sapiens
mRNA k 24 Synthetic construct


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 7.03 Å
  • R-Value Free: 0.359
  • R-Value Work: 0.345
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 297.75 α = 90.00
b = 297.75 β = 90.00
c = 485.16 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-05-30
  • Released Date: 2013-07-24
  • Deposition author(s): Lomakin, I.B., Steitz, T.A.

Revision History

  • 2013-09-04
    Type: Citation | Details: Citation update
  • 2013-08-07
    Type: Citation | Details: Citation update