Structural and energetic basis of folded-protein transport by the FimD usher.

Geibel, S; Procko, E; Hultgren, S.J; Baker, D; Waksman, G.

Macromolecule Content

Unique protein chains: 5

4J3O

Crystal structure of the FimD usher traversed by the pilus tip complex assembly composed of FimC:FimF:FimG:FimH

DOI: 10.2210/pdb4j3o/pdb

Classification: CELL ADHESION / CHAPERONE / MEMBRANE PROTEIN
Deposited: 2013-02-06 Released: 2013-04-10
Deposition author(s): Geibel, S., Waksman, G.
Organism: Escherichia coli
Expression System: Escherichia coli
Mutation(s): 1

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.8 Å
R-Value Free: 0.299
R-Value Work: 0.248

wwPDB Validation 3D Report Full Report

Literature

Macromolecules

Classification: CELL ADHESION / CHAPERONE / MEMBRANE PROTEIN

Total Structure Weight: 176347.25

Macromolecule Entities
Molecule	Chains	Length	Organism	Details
Protein FimG	G	144	Escherichia coli	Fragment: UNP residues 24-167 Gene Name(s): fimG b4319 JW4282
Metabolic Pathways Maps: Reactions: ESCHER BiGG
Protein Feature View - UniProtKB AC: P08190 UniProt Full Protein Feature View for P08190 Find similar proteins by: Sequence \| Structure Show Detailed Protein Feature View for P08190/4J3O
Protein FimH	H	279	Escherichia coli	Fragment: UNP residues 22-300 Gene Name(s): fimH b4320 JW4283
Metabolic Pathways Maps: Reactions: ESCHER BiGG
Protein Feature View - UniProtKB AC: P08191 UniProt Full Protein Feature View for P08191 Find similar proteins by: Sequence \| Structure Show Detailed Protein Feature View for P08191/4J3O
Chaperone protein FimC	C	211	Escherichia coli	Fragment: UNP residues 37-241 Gene Name(s): fimC b4316 JW4279
Metabolic Pathways Maps: Reactions: ESCHER BiGG
Protein Feature View - UniProtKB AC: P31697 UniProt Full Protein Feature View for P31697 Find similar proteins by: Sequence \| Structure Show Detailed Protein Feature View for P31697/4J3O
Protein FimF	F	154	Escherichia coli	Fragment: UNP residues 21-176 Gene Name(s): fimF b4318 JW4281
Metabolic Pathways Maps: Reactions: ESCHER BiGG
Protein Feature View - UniProtKB AC: P08189 UniProt Full Protein Feature View for P08189 Find similar proteins by: Sequence \| Structure Show Detailed Protein Feature View for P08189/4J3O
Outer membrane usher protein FimD	D	843	Escherichia coli	Fragment: UNP residues 46-878 Mutation: T348P Gene Name(s): fimD b4317 JW5780
Metabolic Pathways Maps: Reactions: ESCHER BiGG
Protein Feature View - UniProtKB AC: P30130 UniProt Full Protein Feature View for P30130 Find similar proteins by: Sequence \| Structure Show Detailed Protein Feature View for P30130/4J3O

Membrane Protein

Source: mpstruc | Group: BETA-BARREL

Subgroup Name: Beta-Barrel Membrane Proteins: Monomeric/Dimeric

Protein Name: P pilus FimD usher bound to FimC:FimH substrate

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 3.8 Å
R-Value Free: 0.299
R-Value Work: 0.248
Space Group: P 4₂ 2₁ 2

Unit Cell:

Length (Å)	Angle (°)
a = 122.36	α = 90.00
b = 122.36	β = 90.00
c = 328.46	γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots

Entry History

Deposition Data

Deposited Date: 2013-02-06
Released Date: 2013-04-10
Deposition author(s): Geibel, S., Waksman, G.

Revision History

2013-04-24
Type: Database references

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