4HPY

Crystal structure of RV144-elicited antibody CH59 in complex with V2 peptide

Structural Biology Knowledgebase: 4HPY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.187
  • R-Value Work: 0.171

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4HPY

Classification: Immune System / Viral Protein

Total Structure Weight: 49456.53

Macromolecule Entities
Molecule Chains Length Organism Details
CH59 Fab heavy chain H 225 Homo sapiens Gene Name(s): DKFZp686P15220
CH59 Fab light chain L 215 Homo sapiens Gene Name(s): IGL@
Envelope glycoprotein gp160 P 19 Human immunodeficiency virus 1 Fragment: UNP residues 160-178
Gene Name(s): env

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

L GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.187
  • R-Value Work: 0.171
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 41.89 α = 90.00
b = 79.15 β = 90.00
c = 127.11 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-10-24
  • Released Date: 2013-02-06
  • Deposition author(s): McLellan, J.S., Gorman, J., Haynes, B.F., Kwong, P.D.

Revision History

No revisions since initial release