4HL4

Crystal structure of the human TBC1D20 RabGAP domain

Structural Biology Knowledgebase: 4HL4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.203

Literature

Macromolecules
Sequence Display for 4HL4

Classification: HYDROLASE ACTIVATOR

Total Structure Weight: 33874.11

Macromolecule Entities
Molecule Chains Length Organism Details
TBC1 domain family member 20 A 292 Homo sapiens Fragment: UNP RESIDUES 14-305
Gene Name(s): TBC1D20 Gene View C20orf140
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BEF
Query on BEF

A BERYLLIUM TRIFLUORIDE ION
Be F3
OGIAHMCCNXDTIE-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ACT
Query on ACT

A ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.235
  • R-Value Work: 0.203
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 73.55 α = 90.00
b = 73.55 β = 90.00
c = 113.00 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-10-16
  • Released Date: 2013-01-16
  • Deposition author(s): Gazdag, E.M., Gavriljuk, K., Itzen, A., Koetting, C., Gerwert, K., Goody, R.S.

Revision History

No revisions since initial release