4H5B

Crystal Structure of DR_1245 from Deinococcus radiodurans

Structural Biology Knowledgebase: 4H5B SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.195
  • R-Value Work: 0.164

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4H5B

Classification: UNKNOWN FUNCTION

Total Structure Weight: 35820.99

Macromolecule Entities
Molecule Chains Length Organism Details
DR_1245 protein A, B 153 Deinococcus radiodurans Gene Name(s): DR_1245

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BR
Query on BR

A BROMIDE ION
Br
CPELXLSAUQHCOX-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
K
Query on K

A POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.195
  • R-Value Work: 0.164
  • Space Group: P 65
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 91.71 α = 90.00
b = 91.71 β = 90.00
c = 87.75 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-09-18
  • Released Date: 2013-01-30
  • Deposition author(s): Norais, C., Servant, P., Bouthier-de-la-Tour, C., Coureux, P.D., Ithurbide, S., Vannier, F., Guerin, P., Dulberger, C.L., Satyshur, K.A., Keck, J.L., Armengaud, J., Cox, M.M., Sommer, S.

Revision History

  • 2013-03-13
    Type: Citation | Details: Citation update