4E58

Crystal structure of GCC(LCG)CCGC duplex containing LNA residue

Structural Biology Knowledgebase: 4E58 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.301
  • R-Value Work: 0.258

Literature

Macromolecules
Sequence Display for 4E58

Classification: RNA

Total Structure Weight: 7777.90

Macromolecule Entities
Molecule Chains Length Organism Details
RNA duplex containing CCG repeats C, D, E 8 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

C, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
LCG
Query on LCG
C, D, E RNA LINKING C11 H14 N5 O8 P DG

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.301
  • R-Value Work: 0.258
  • Space Group: P 43 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 42.02 α = 90.00
b = 42.02 β = 90.00
c = 81.66 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2012-03-14
  • Released Date: 2012-12-12
  • Deposition author(s): Kiliszek, A., Kierzek, R., Krzyzosiak, W.J., Rypniewski, R.

Revision History

No revisions since initial release