4E4Q

Crystal structure of PPARgamma with the ligand FS214

Structural Biology Knowledgebase: 4E4Q SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.298
  • R-Value Work: 0.242

Literature

Macromolecules
Sequence Display for 4E4Q

Classification: TRANSCRIPTION

Total Structure Weight: 65748.66

Macromolecule Entities
Molecule Chains Length Organism Details
Peroxisome proliferator-activated receptor gamma A, B 287 Homo sapiens Fragment: Ligand binding domain (UNP residues 223-505)
Gene Name(s): PPARG Gene View NR1C3
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
RRH
Query on RRH

A (2R)-3-phenyl-2-{[2'-(propan-2-yl)biphenyl- 4-yl]oxy}propanoic acid
C24 H24 O3
LGZFNUULAZCXCA-HSZRJFAPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.298
  • R-Value Work: 0.242
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 92.77 α = 90.00
b = 61.27 β = 102.15
c = 118.28 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-03-13
  • Released Date: 2013-01-23
  • Deposition author(s): Pochetti, G., Montanari, R., Loiodice, F., Fracchiolla, G., Laghezza, A., Carbonara, G., Piemontese, L., Lavecchia, A., Novellino, E.

Revision History

No revisions since initial release