4DIA

CRYSTAL STRUCTURE OF THE D248N mutant of 2-PYRONE-4,6-DICARBOXYLIC ACID HYDROLASE FROM SPHINGOMONAS PAUCIMOBILIS complexed with substrate at pH 4.6

Structural Biology Knowledgebase: 4DIA SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.180

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4DIA

Classification: HYDROLASE

Total Structure Weight: 34030.07

Macromolecule Entities
Molecule Chains Length Organism Details
2-pyrone-4,6-dicarbaxylate hydrolase A 303 Sphingomonas paucimobilis Mutation: D248N
Gene Name(s): ligI
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.180
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 52.27 α = 90.00
b = 54.06 β = 90.00
c = 96.32 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-01-11
  • Released Date: 2012-10-03
  • Deposition author(s): Malashkevich, V.N., Toro, R., Hobbs, M.E., Raushel, F.M., Almo, S.C.
  • Previous versions: 4D9D

Revision History

  • 2013-02-20
    Type: Citation | Details: Citation update
  • 2013-01-23
    Type: Citation | Details: Citation update
  • 2013-01-09
    Type: Citation | Details: Citation update