4D5U

Structure of OmpF in I2

Structural Biology Knowledgebase: 4D5U SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.5 Å
  • R-Value Free: 0.283
  • R-Value Work: 0.229

Literature

Macromolecules
Sequence Display for 4D5U

Classification: STRUCTURAL PROTEIN

Total Structure Weight: 222687.89

Macromolecule Entities
Molecule Chains Length Organism Details
OUTER MEMBRANE PROTEIN F A, B, C..., D, E, FA, B, C, D, E, F 340 Escherichia coli Details: THIS IS THE MATURE FORM OF WILD-TYPE OMPF EXTRACTED FROM E. COLI, WITHOUT MODIFICATIONS TO THE PROTEIN. AMINO-ACID ALA1 IS THE FIRST AMINO-ACID OF THE PROTEIN, THE FIRST 22 ARE OF A SIGNAL PEPTIDE BEING CLEAVED OFF.
Gene Name(s): ompF cmlB coa cry tolF b0929 JW0912
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: BETA-BARREL

Subgroup Name: Beta-Barrel Membrane Proteins: Porins and Relatives

Protein Name: OmpF Porin



Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.5 Å
  • R-Value Free: 0.283
  • R-Value Work: 0.229
  • Space Group: I 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 159.73 α = 90.00
b = 115.69 β = 104.95
c = 222.85 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-11-07
  • Released Date: 2015-12-16
  • Deposition author(s): Chaptal, V., Kilburg, A., Flot, D., Wiseman, B., Aghajari, N., Jault, J.M., Falson, P.

Revision History

  • 2016-01-20
    Type: Citation | Details: JRNL