4AL0

Crystal structure of Human PS-1

Structural Biology Knowledgebase: 4AL0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.16 Å
  • R-Value Free: 0.130
  • R-Value Work: 0.122

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4AL0

Classification: ISOMERASE

Total Structure Weight: 18784.75

Macromolecule Entities
Molecule Chains Length Organism Details
PROSTAGLANDIN E SYNTHASE A 152 Homo sapiens EC#: 5.3.99.3 IUBMB
Gene Name(s): PTGES Gene View MGST1L1 MPGES1 PGES PIG12

Membrane Protein

Source: mpstruc | Group: ALPHA-HELICAL

Subgroup Name: Membrane-Associated Proteins in Eicosanoid and Glutathione Metabolism (MAPEG)

Protein Name: Microsomal Prostaglandin E Synthase 1


Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GSH
Query on GSH

A GLUTATHIONE
C10 H17 N3 O6 S
RWSXRVCMGQZWBV-WDSKDSINSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BOG
Query on BOG

A B-OCTYLGLUCOSIDE
C14 H28 O6
HEGSGKPQLMEBJL-RKQHYHRCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PLM
Query on PLM

A PALMITIC ACID
C16 H32 O2
IPCSVZSSVZVIGE-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.16 Å
  • R-Value Free: 0.130
  • R-Value Work: 0.122
  • Space Group: H 3

Unit Cell:

Length (Å) Angle (°)
a = 76.74 α = 90.00
b = 76.74 β = 90.00
c = 123.40 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-02-29
  • Released Date: 2013-02-06
  • Deposition author(s): Sjogren, T., Nord, J., Ek, M., Johansson, P., Liu, G., Geschwindner, S.

Revision History

  • 2013-03-20
    Type: Citation | Details: JRNL
  • 2013-02-27
    Type: Citation | Details: JRNL