4ADW

CRYSTAL STRUCTURE OF LEISHMANIA INFANTUM TRYPANOTHIONE REDUCTASE IN COMPLEX WITH NADPH AND TRYPANOTHIONE

Structural Biology Knowledgebase: 4ADW SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.61 Å
  • R-Value Free: 0.304
  • R-Value Work: 0.249

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4ADW

Classification: OXIDOREDUCTASE

Total Structure Weight: 115025.87

Macromolecule Entities
Molecule Chains Length Organism Details
TRYPANOTHIONE REDUCTASE A, B 511 Leishmania infantum EC#: 1.8.1.12 IUBMB
Gene Name(s): TRYR LINJ_05_0350

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A, B FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NDP
Query on NDP

A, B NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
C21 H30 N7 O17 P3
ACFIXJIJDZMPPO-NNYOXOHSSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GCG
Query on GCG

A, B BIS(GAMMA-GLUTAMYL-CYSTEINYL-GLYCINYL)SPERMIDINE
TRYPANOTHIONE (Synonym)
C27 H49 N9 O10 S2
PHDOXVGRXXAYEB-VJANTYMQSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.61 Å
  • R-Value Free: 0.304
  • R-Value Work: 0.249
  • Space Group: P 41
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 103.94 α = 90.00
b = 103.94 β = 90.00
c = 192.24 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-01-04
  • Released Date: 2013-01-16
  • Deposition author(s): Baiocco, P., Ilari, A., Colotti, G., Malatesta, F., Fiorillo, A.

Revision History

  • 2013-07-10
    Type: Citation | Details: JRNL
  • 2013-06-26
    Type: Citation | Details: JRNL