3ZKJ

Crystal Structure of Ankyrin Repeat and Socs Box-Containing Protein 9 (Asb9) in Complex with Elonginb and Elonginc

Structural Biology Knowledgebase: 3ZKJ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.58 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.227

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3ZKJ

Classification: TRANSCRIPTION

Total Structure Weight: 105403.95

Macromolecule Entities
Molecule Chains Length Organism Details
ANKYRIN REPEAT AND SOCS BOX PROTEIN 9 A, D 261 Homo sapiens Fragment: RESIDUES 35-294
Gene Name(s): ASB9 Gene View
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1 B, E 96 Homo sapiens Fragment: RESIDUES 17-112
Gene Name(s): TCEB1 Gene View
TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2 C, F 118 Homo sapiens Fragment: RESIDUES 221-338
Gene Name(s): TCEB2 Gene View

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PEG
Query on PEG

A DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A, D 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A, F CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.58 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.227
  • Space Group: P 21 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 102.86 α = 90.00
b = 110.74 β = 90.00
c = 113.41 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-01-23
  • Released Date: 2013-01-30
  • Deposition author(s): Muniz, J.R.C., Guo, K., Zhang, Y., Ayinampudi, V., Savitsky, P., Keates, T., Filippakopoulos, P., Vollmar, M., Yue, W.W., Krojer, T., Ugochukwu, E., von Delft, F., Knapp, S., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Bullock, A.N.
  • Previous versions: 2XAI

Revision History

  • 2013-08-28
    Type: Citation | Details: JRNL
  • 2013-07-10
    Type: Citation | Details: JRNL
  • 2013-07-03
    Type: Citation | Details: JRNL
  • 2013-07-03
    Type: Other | Details: REMARK 900
  • 2013-07-03
    Type: Refinement description | Details: REMARK 3
  • 2013-07-03
    Type: Entry authorship | Details: AUTHOR