3WBZ

Crystal structure of C. albicans tRNA(His) guanylyltransferase (Thg1) with ATP

Structural Biology Knowledgebase: 3WBZ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.39 Å
  • R-Value Free: 0.208
  • R-Value Work: 0.176

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3WBZ

Classification: TRANSFERASE

Total Structure Weight: 270214.28

Macromolecule Entities
Molecule Chains Length Organism Details
Likely histidyl tRNA-specific guanylyltransferase A, B, C..., D, E, F, G, HA, B, C, D, E, F, G, H 271 Candida albicans EC#: 2.7.7.79 IUBMB
Gene Name(s): THG1 orf19.7063 CaO19.7063 I503_05065 W5Q_05109
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ATP
Query on ATP

A, B, C, D, E, F, G, H ADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B, C, D, E, F, G, H MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.39 Å
  • R-Value Free: 0.208
  • R-Value Work: 0.176
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 74.83 α = 90.00
b = 217.87 β = 113.68
c = 87.24 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-05-24
  • Released Date: 2013-12-18
  • Deposition author(s): Nakamura, A., Nemoto, T., Sonoda, T., Yamashita, K., Tanaka, I., Yao, M.

Revision History

  • 2014-02-05
    Type: Other | Details: db_name of remark 900 update
  • 2014-01-15
    Type: Citation | Details: Citation update