3VV9

Crystal structure of cyanide-insensitive alternative oxidase from Trypanosoma brucei


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.192

Literature

Macromolecules
Sequence Display for 3VV9

Classification: OXIDOREDUCTASE

Total Structure Weight: 151089.20

Macromolecule Entities
Molecule Chains Length Organism Details
Alternative oxidase, mitochondrial A, B, C, D 329 Trypanosoma brucei EC#: 1 IUBMB
Gene Name(s): AOX
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: MONOTOPIC MEMBRANE PROTEINS

Subgroup Name: Oxidases

Protein Name: Alternative oxidase (AOX), cyanide-insensitive


Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FE
Query on FE

A, B, C, D FE (III) ION
Fe
VTLYFUHAOXGGBS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
OH
Query on OH

A, B, C, D HYDROXIDE ION
H O
XLYOFNOQVPJJNP-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.247
  • R-Value Work: 0.192
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 261.31 α = 90.00
b = 63.12 β = 121.38
c = 136.46 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-07-17
  • Released Date: 2013-03-13
  • Deposition author(s): Shiba, T., Kido, Y., Sakamoto, K., Inaoka, D.K., Tsuge, C., Tatsumi, R., Balogun, E.O., Nara, T., Aoki, T., Honma, T., Tanaka, A., Inoue, M., Matsuoka, S., Saimoto, H., Moore, A.L., Harada, S., Kita, K.

Revision History

  • 2013-03-27
    Type: Citation | Details: Citation update