3VSF

Crystal structure of 1,3Gal43A, an exo-beta-1,3-Galactanase from Clostridium thermocellum

Structural Biology Knowledgebase: 3VSF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.76 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.236

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3VSF

Classification: SUGAR BINDING PROTEIN

Total Structure Weight: 353012.84

Macromolecule Entities
Molecule Chains Length Organism Details
Ricin B lectin A, B, C..., D, E, FA, B, C, D, E, F 526 Ruminiclostridium thermocellum Fragment: UNP residues 31-520
Gene Name(s): Cthe_0661

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A, B, C, D, E, F GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.76 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.236
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 107.60 α = 90.00
b = 122.51 β = 90.00
c = 405.53 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-04-25
  • Released Date: 2012-12-05
  • Deposition author(s): Jiang, D., Fan, J., Wang, X., Zhao, Y., Huang, B., Zhang, X.C.

Revision History

No revisions since initial release