3VQ9

HIV-1 IN core domain in complex with 6-fluoro-1,3-benzothiazol-2-amine

Structural Biology Knowledgebase: 3VQ9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.196

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3VQ9

Classification: TRANSFERASE / TRANSFERASE INHIBITOR

Total Structure Weight: 53158.09

Macromolecule Entities
Molecule Chains Length Organism Details
POL polyprotein A, B, C 161 Human immunodeficiency virus 1 Fragment: integrase core domain, UNP residues 765-925
Mutation: F185H
Gene Name(s): pol
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FBB
Query on FBB

A 6-fluoro-1,3-benzothiazol-2-amine
C7 H5 F N2 S
CJLUXPZQUXVJNF-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.196
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 99.33 α = 90.00
b = 72.91 β = 108.60
c = 79.85 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-03-20
  • Released Date: 2013-01-30
  • Deposition author(s): Wielens, J., Chalmers, D.K., Parker, M.W., Scanlon, M.J.

Revision History

No revisions since initial release