3NKY

Structure of a mutant P44S of Foot-and-mouth disease Virus RNA-dependent RNA polymerase

Structural Biology Knowledgebase: 3NKY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.28 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.240

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3NKY

Classification: TRANSFERASE

Total Structure Weight: 53483.80

Macromolecule Entities
Molecule Chains Length Organism Details
3D polymerase A 476 Foot-and-mouth disease virus Mutation: P44S
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.28 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.240
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 93.53 α = 90.00
b = 93.53 β = 90.00
c = 121.01 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-06-21
  • Released Date: 2011-05-25
  • Deposition author(s): Agudo, R., Ferrer-Orta, C., Arias, A., Perez-Luque, R., Verdaguer, N., Domingo, E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4