2ZFG

Structure of OMPF PORIN


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.59 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.181

Literature

Macromolecules
Sequence Display for 2ZFG

Classification: MEMBRANE PROTEIN

Total Structure Weight: 37751.84

Macromolecule Entities
Molecule Chains Length Organism Details
Outer membrane protein F A 340 Escherichia coli Gene Name(s): ompF cmlB coa cry tolF b0929 JW0912
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: BETA-BARREL

Subgroup Name: Beta-Barrel Membrane Proteins: Porins and Relatives

Protein Name: OmpF Porin


Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
C8E
Query on C8E

A (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
C16 H34 O5
FEOZZFHAVXYAMB-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.59 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.181
  • Space Group: P 3 2 1

Unit Cell:

Length (Å) Angle (°)
a = 116.92 α = 90.00
b = 116.92 β = 90.00
c = 51.35 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-01-04
  • Released Date: 2008-07-29
  • Deposition author(s): Cramer, W.A., Zakharov, S.D., Yamashita, E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4