2YH6

STRUCTURE OF THE N-TERMINAL DOMAIN OF BAMC FROM E. COLI

Structural Biology Knowledgebase: 2YH6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.195

Literature

Macromolecules
Sequence Display for 2YH6

Classification: LIPID BINDING PROTEIN

Total Structure Weight: 50708.34

Macromolecule Entities
Molecule Chains Length Organism Details
LIPOPROTEIN 34 A, B, C, D 112 Escherichia coli Fragment: N-TERMINAL DOMAIN, RESIDUES 101-212
Details: DOMAIN WAS IDENTIFIED BY LIMITED PROTEOLYSIS
Gene Name(s): bamC dapX nlpB b2477 JW2462
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: BETA-BARREL

Subgroup Name: Omp85-TpsB Outer Membrane Transporter Superfamily

Protein Name: BamC component of the Bam β-barrel assembly machine


Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B, C, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.195
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 46.58 α = 102.70
b = 46.63 β = 92.86
c = 60.21 γ = 118.20

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-04-27
  • Released Date: 2011-05-25
  • Deposition author(s): Zeth, K., Albrecht, R.

Revision History

  • 2011-08-10
    Type: Version format compliance | Details: REMARK 4
  • 2011-08-10
    Type: Citation | Details: JRNL