2W96

CRYSTAL STRUCTURE OF CDK4 IN COMPLEX WITH A D-TYPE CYCLIN

Structural Biology Knowledgebase: 2W96 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.203

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2W96

Classification: CELL CYCLE

Total Structure Weight: 65671.48

Macromolecule Entities
Molecule Chains Length Organism Details
G1/S-SPECIFIC CYCLIN-D1 A 271 Homo sapiens Gene Name(s): CCND1 Gene View BCL1 PRAD1
CELL DIVISION PROTEIN KINASE 4 B 306 Homo sapiens EC#: 2.7.11.22 IUBMB
Fragment: KINASE DOMAIN, RESIDUES 1-44,48-303
Mutation: G43E, G44E, T172D
Gene Name(s): CDK4 Gene View

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.203
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 55.91 α = 90.00
b = 64.68 β = 90.00
c = 168.69 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-01-21
  • Released Date: 2009-03-10
  • Deposition author(s): Day, P.J., Cleasby, A., Tickle, I.J., Reilly, M.O., Coyle, J.E., Holding, F.P., Mcmenamin, R.L., Yon, J., Chopra, R., Lengauer, C., Jhoti, H.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4