2SOD

DETERMINATION AND ANALYSIS OF THE 2 ANGSTROM STRUCTURE OF COPPER, ZINC SUPEROXIDE DISMUTASE

Structural Biology Knowledgebase: 2SOD SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Work: 0.256

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2SOD

Classification: OXIDOREDUCTASE (SUPEROXIDE ACCEPTOR)

Total Structure Weight: 62913.70

Macromolecule Entities
Molecule Chains Length Organism Details
COPPER,ZINC SUPEROXIDE DISMUTASE B, G, O, Y 152 Bos taurus EC#: 1.15.1.1 IUBMB
Gene Name(s): SOD1 Gene View

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

B, G, O, Y ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CU
Query on CU

B, G, O, Y COPPER (II) ION
Cu
JPVYNHNXODAKFH-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
ACE
Query on ACE
B, G, O, Y NON-POLYMER C2 H4 O --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Observed:
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 93.65 α = 90.00
b = 90.33 β = 95.10
c = 71.65 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1980-03-25
  • Released Date: 1980-05-07
  • Deposition author(s): Tainer, J.A., Getzoff, E.D., Richardson, J.S., Richardson, D.C.
  • Previous versions: 1SOD

Revision History

  • 2011-07-13
    Type: Flag nonstandard coordinate frame | Details: Tagged nonstandard coordinate frame
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4