2JHR

CRYSTAL STRUCTURE OF MYOSIN-2 MOTOR DOMAIN IN COMPLEX WITH ADP-METAVANADATE AND PENTABROMOPSEUDILIN

Structural Biology Knowledgebase: 2JHR SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.217

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2JHR

Classification: CONTRACTILE PROTEIN

Total Structure Weight: 91120.43

Macromolecule Entities
Molecule Chains Length Organism Details
MYOSIN-2 HEAVY CHAIN A 788 Dictyostelium discoideum Fragment: MOTOR-DOMAIN, RESIDUES 2-761
Details: NON-HYDROLYSABLE ATP-ANALOG ADP-METAVANADATE (B), ALLOSTERIC INHIBITOR PENTABROMOPSEUDILIN (D)
Gene Name(s): mhcA DDB_G0286355
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PBQ
Query on PBQ

A PENTABROMOPSEUDILIN
C10 H4 Br5 N O
LXMNWKJHYOZUQL-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
AD9
Query on AD9

A ADP METAVANADATE
C10 H16 N5 O13 P2 V
XLVFTLJPBLXCED-KWIZKVQNSA-K
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.217
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 89.76 α = 90.00
b = 150.46 β = 90.00
c = 154.55 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-03-25
  • Released Date: 2009-01-13
  • Deposition author(s): Fedorov, R., Boehl, M., Tsiavaliaris, G., Hartmann, F.K., Baruch, P., Brenner, B., Martin, R., Knoelker, H.J., Gutzeit, H.O., Manstein, D.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4