2JGK

Crystal structure of mouse acetylcholinesterase inhibited by aged fenamiphos

Structural Biology Knowledgebase: 2JGK SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.204

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2JGK

Classification: HYDROLASE

Total Structure Weight: 121215.09

Macromolecule Entities
Molecule Chains Length Organism Details
ACETYLCHOLINESTERASE A, B 548 Mus musculus EC#: 3.1.1.7 IUBMB
Fragment: CATALYTIC DOMAIN, RESIDUES 32-574
Gene Name(s): Ache

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
P6G
Query on P6G

B HEXAETHYLENE GLYCOL
POLYETHYLENE GLYCOL PEG400 (Synonym)
C12 H26 O7
IIRDTKBZINWQAW-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NAG
Query on NAG

A N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
SVZ
Query on SVZ
A, B L-PEPTIDE LINKING C6 H15 N2 O5 P SER

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.253
  • R-Value Work: 0.204
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 79.71 α = 90.00
b = 111.26 β = 90.00
c = 226.99 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-02-13
  • Released Date: 2007-04-17
  • Deposition author(s): Hornberg, A., Tunemalm, A.-K., Ekstrom, F.

Revision History

  • 2014-01-29
    Type: Version format compliance | Details: REMARK 4
  • 2014-01-29
    Type: Function and keywords | Details: KEYWDS
  • 2014-01-29
    Type: Non-polymer description | Details: HETSYN,FORMUL,HETNAM
  • 2014-01-29
    Type: Other | Details: REMARK 525,MODRES,REMARK 610
  • 2014-01-29
    Type: Binding sites and description | Details: REMARK 800,SITE
  • 2014-01-29
    Type: Source and taxonomy | Details: SOURCE
  • 2014-01-29
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2014-01-29
    Type: Geometry validation | Details: REMARK 500