2F8I

Human transthyretin (TTR) complexed with Benzoxazole

Structural Biology Knowledgebase: 2F8I SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.54 Å
  • R-Value Free: 0.246
  • R-Value Work: 0.217

Literature

Macromolecules
Sequence Display for 2F8I

Classification: HORMONE / GROWTH FACTOR

Total Structure Weight: 28171.22

Macromolecule Entities
Molecule Chains Length Organism Details
Transthyretin A, B 127 Homo sapiens Gene Name(s): TTR Gene View PALB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
205
Query on 205

A, B 2-(2,6-DICHLOROPHENYL)-1,3-BENZOXAZOLE-6- CARBOXYLIC ACID
C14 H7 Cl2 N O3
XVNRKPCHMYOPPL-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
205 N/A in BindingDB
N/A in BindingMoad
Kd: 55 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.54 Å
  • R-Value Free: 0.246
  • R-Value Work: 0.217
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 43.07 α = 90.00
b = 84.69 β = 90.00
c = 64.73 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-12-02
  • Released Date: 2005-12-20
  • Deposition author(s): Palaninathan, S.K., Mohamedmohaideen, N.N., Sacchettini, J.C, Kelly, J.W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4