2BKI

Myosin VI nucleotide-free (MDinsert2-IQ) crystal structure

Structural Biology Knowledgebase: 2BKI SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.304
  • R-Value Work: 0.264

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2BKI

Classification: MOTOR PROTEIN / METAL-BINDING PROTEIN

Total Structure Weight: 132248.17

Macromolecule Entities
Molecule Chains Length Organism Details
UNCONVENTIONAL MYOSIN A 858 Sus scrofa Fragment: DOMAIN LONG-S1, RESIDUES 1-858
Gene Name(s): MYO6 Gene View
CALMODULIN B, D 149 Gallus gallus Gene Name(s): CALM CAM RCJMB04_24e7

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.304
  • R-Value Work: 0.264
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 104.78 α = 90.00
b = 250.17 β = 90.00
c = 67.27 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-02-16
  • Released Date: 2005-06-07
  • Deposition author(s): Menetrey, J., Bahloul, A., Yengo, C., Wells, A., Morris, C., Sweeney, H.L., Houdusse, A.

Revision History

  • 2015-09-16
    Type: Polymer description | Details: COMPND
  • 2015-09-16
    Type: Entry authorship | Details: AUTHOR
  • 2015-09-16
    Type: Source and taxonomy | Details: SOURCE
  • 2015-09-16
    Type: Other | Details: REMARK 525,MASTER
  • 2015-09-16
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2015-09-16
    Type: Version format compliance | Details: REMARK 4
  • 2015-09-16
    Type: Function and keywords | Details: KEYWDS
  • 2015-09-16
    Type: Citation | Details: JRNL
  • 2015-09-16
    Type: Sequence database correspondence | Details: SEQADV,DBREF
  • 2015-09-16
    Type: Non-polymer description | Details: FORMUL
  • 2015-09-16
    Type: Geometry validation | Details: REMARK 500