1XKH

Pyoverdine outer membrane receptor FpvA from Pseudomonas aeruginosa PAO1 bound to pyoverdine

Structural Biology Knowledgebase: 1XKH SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.6 Å
  • R-Value Free: 0.288
  • R-Value Work: 0.259

Literature

Macromolecules
Sequence Display for 1XKH

Classification: MEMBRANE PROTEIN

Total Structure Weight: 238457.98

Macromolecule Entities
Molecule Chains Length Organism Details
Ferripyoverdine receptor A, B, C 687 Pseudomonas aeruginosa Fragment: residues 129-815
Gene Name(s): fpvA PA2398
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Pyoverdin C-E I, J, K 8 Pseudomonas aeruginosa

Membrane Protein

Source: mpstruc | Group: BETA-BARREL

Subgroup Name: Beta-Barrel Membrane Proteins: Monomeric/Dimeric

Protein Name: FpvA, Pyoverdine receptor


Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PVE
Query on PVE

I, J, K (1S)-1-CARBOXY-5-[(3-CARBOXYPROPANOYL)AMINO]- 8,9-DIHYDROXY-1,2,3,4-TETRAHYDROPYRIMIDO[1,2- A]QUINOLIN-11-IUM
C17 H18 N3 O7
PKIXPGNFUHEBHN-JTQLQIEISA-O
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B, C SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.6 Å
  • R-Value Free: 0.288
  • R-Value Work: 0.259
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 137.45 α = 90.00
b = 231.34 β = 104.57
c = 121.69 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-09-29
  • Released Date: 2005-03-15
  • Deposition author(s): Cobessi, D., Celia, H., Folschweiller, N., Schalk, I.J., Abdallah, M.A., Pattus, F.

Revision History

  • 2015-04-22
    Type: Polymer description | Details: FIX PRD info
  • 2012-12-12
    Type: Other | Details: Add PRD info
  • 2011-07-27
    Type: Version format compliance | Details: added version revdat
  • 2011-07-27
    Type: Polymer description | Details: Added description to _pdbx_struct_group_list
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4