1VAT

Iodine derivative of hen egg-white lysozyme

Structural Biology Knowledgebase: 1VAT SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.205

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1VAT

Classification: HYDROLASE

Total Structure Weight: 14585.01

Macromolecule Entities
Molecule Chains Length Organism Details
Lysozyme C A 129 Gallus gallus EC#: 3.2.1.17 IUBMB
Gene Name(s): LYZ Gene View

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
IOD
Query on IOD

A IODIDE ION
I
XMBWDFGMSWQBCA-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.205
  • Space Group: P 43 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 78.35 α = 90.00
b = 78.35 β = 90.00
c = 37.54 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-02-19
  • Released Date: 2005-03-08
  • Deposition author(s): Takeda, K., Miyatake, H., Park, S.Y., Kawamoto, M., Kamiya, N., Miki, K.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4