1TVR

HIV-1 RT/9-CL TIBO

Structural Biology Knowledgebase: 1TVR SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Observed: 0.259

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1TVR

Classification: ASPARTYL PROTEASE

Total Structure Weight: 114509.18

Macromolecule Entities
Molecule Chains Length Organism Details
REVERSE TRANSCRIPTASE A 558 Human immunodeficiency virus 1 EC#: 2.7.7.49 IUBMB
Mutation: C280S
Gene Name(s): gag-pol
REVERSE TRANSCRIPTASE B 427 Human immunodeficiency virus 1 EC#: 2.7.7.49 IUBMB
Mutation: C280S
Gene Name(s): gag-pol

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TB9
Query on TB9

A 4-CHLORO-8-METHYL-7-(3-METHYL-BUT-2-ENYL)- 6,7,8,9-TETRAHYDRO-2H-2,7,9A-TRIAZA-BENZO[CD]AZULENE- 1-THIONE
C16 H20 Cl N3 S
RCSLUNOLLUVOOG-NSHDSACASA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
TB9 EC50: 33 - 5600 nM (98) BindingDB
IC50: 0.01 nM (98) BindingDB

N/A in BindingMoad
IC50: 33 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Observed: 0.259
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 226.00 α = 90.00
b = 69.30 β = 107.00
c = 104.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1996-04-16
  • Released Date: 1997-03-12
  • Deposition author(s): Das, K., Ding, J., Hsiou, Y., Arnold, E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4