1T19

Early intermediate IE2 from time-resolved crystallography of the E46Q mutant of PYP

Structural Biology Knowledgebase: 1T19 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.202

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1T19

Classification: photoreceptor

Total Structure Weight: 14051.85

Macromolecule Entities
Molecule Chains Length Organism Details
Photoactive yellow protein A 125 Halorhodospira halophila Mutation: E46Q
Gene Name(s): pyp

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HC4
Query on HC4

A 4'-HYDROXYCINNAMIC ACID
PARA-COUMARIC ACID (Synonym)
C9 H8 O3
NGSWKAQJJWESNS-ZZXKWVIFSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.202
  • Space Group: P 63
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 66.92 α = 90.00
b = 66.92 β = 90.00
c = 41.00 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-04-15
  • Released Date: 2005-01-18
  • Deposition author(s): Rajagopal, S., Anderson, S., Srajer, V., Schmidt, M., Pahl, R., Moffat, K.

Revision History

  • 2015-09-09
    Type: Other | Details: added NUMMDL record
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4