1S9E

CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R129385

Structural Biology Knowledgebase: 1S9E SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.316
  • R-Value Work: 0.253

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1S9E

Classification: TRANSFERASE

Total Structure Weight: 115157.20

Macromolecule Entities
Molecule Chains Length Organism Details
POL polyprotein [Contains:Reverse transcriptase] A 560 Human immunodeficiency virus 1 EC#: 2.7.7.49 IUBMB
Fragment: P66 SUBUNIT
Mutation: C280S
Gene Name(s): gag-pol
POL polyprotein [Contains: Reverse transcriptase] B 430 Human immunodeficiency virus 1 EC#: 2.7.7.49 IUBMB
Fragment: P51 SUBUNIT
Mutation: C280S
Gene Name(s): gag-pol

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ADB
Query on ADB

A 4-[4-AMINO-6-(2,6-DICHLORO-PHENOXY)-[1,3,5]TRIAZIN- 2-YLAMINO]-BENZONITRILE
C16 H10 Cl2 N6 O
NFNNMVVXXITVGD-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.316
  • R-Value Work: 0.253
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 226.80 α = 90.00
b = 69.30 β = 106.70
c = 104.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-02-04
  • Released Date: 2004-05-11
  • Deposition author(s): Das, K., Clark Jr., A.D., Ludovici, D.W., Kukla, M.J., Decorte, B., Lewi, P.J., Hughes, S.H., Janssen, P.A., Arnold, E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4