1QQP

FOOT-AND-MOUTH DISEASE VIRUS/ OLIGOSACCHARIDE RECEPTOR COMPLEX.

Structural Biology Knowledgebase: 1QQP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Observed: 0.161

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1QQP

Classification: Virus [ VIPERdb ]

Total Structure Weight: 411351.53

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (GENOME POLYPROTEIN) 1 213 Foot-and-mouth disease virus Mutation: I56V, N137S
Details: STRAIN BFS, 1860
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
PROTEIN (GENOME POLYPROTEIN) 2 218 Foot-and-mouth disease virus Mutation: Y130C
Details: STRAIN BFS, 1860
Gene Name(s):
PROTEIN (GENOME POLYPROTEIN) 3 220 Foot-and-mouth disease virus Mutation: Q85H, A168T, G173D
Details: STRAIN BFS, 1860
Gene Name(s):
PROTEIN (GENOME POLYPROTEIN) 4 85 Foot-and-mouth disease virus Mutation: D40N, N41D
Details: STRAIN BFS, 1860
Gene Name(s):

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SGN
Query on SGN

1 N,O6-DISULFO-GLUCOSAMINE
C6 H13 N O11 S2
DQTRACMFIGDHSN-UKFBFLRUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
IDS
Query on IDS

1 2-O-sulfo-alpha-L-idopyranuronic acid
O2-SULFO-GLUCURONIC ACID (Synonym)
C6 H10 O10 S
COJBCAMFZDFGFK-VCSGLWQLSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
IDX
Query on IDX

1 2-O-sulfo-alpha-L-gulopyranuronic acid
C6 H10 O10 S
COJBCAMFZDFGFK-QIUUJYRFSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Observed: 0.161
  • Space Group: I 2 3

Unit Cell:

Length (Å) Angle (°)
a = 345.00 α = 90.00
b = 345.00 β = 90.00
c = 345.00 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-05-20
  • Released Date: 1999-06-18
  • Deposition author(s): Fry, E.E., Lea, S.M., Jackson, T., Newman, J.W.I., Ellard, F.M., Blakemore, W.E., Abu-Ghazaleh, R., Samuel, A., King, A.M.Q., Stuart, D.I.
  • Previous versions: 1FHP

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update