1LUL

DB58, A LEGUME LECTIN FROM DOLICHOS BIFLORUS

Structural Biology Knowledgebase: 1LUL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.226

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1LUL

Classification: LECTIN

Total Structure Weight: 163452.70

Macromolecule Entities
Molecule Chains Length Organism Details
LECTIN DB58 A, B, C..., D, E, FA, B, C, D, E, F 253 Vigna unguiculata Gene Name(s):

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MN
Query on MN

A, B, C, D, E, F MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A, B, C, D, E, F CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.226
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 101.39 α = 90.00
b = 130.95 β = 90.00
c = 138.23 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-06-30
  • Released Date: 1998-12-30
  • Deposition author(s): Hamelryck, T.W., Bouckaert, J., Dao-Thi, M.H., Wyns, L., Etzler, M., Loris, R.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4