1DVZ

CRYSTAL STRUCTURE OF HUMAN TRANSTHYRETIN IN COMPLEX WITH O-TRIFLUOROMETHYLPHENYL ANTHRANILIC ACID

Structural Biology Knowledgebase: 1DVZ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.200
  • R-Value Work: 0.192

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1DVZ

Classification: HORMONE / GROWTH FACTOR

Total Structure Weight: 27123.42

Macromolecule Entities
Molecule Chains Length Organism Details
TRANSTHYRETIN A, B 124 Homo sapiens Gene Name(s): TTR Gene View PALB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
OFL
Query on OFL

A O-TRIFLUOROMETHYLPHENYL ANTHRANILIC ACID
C14 H10 F3 N O2
ONKHJNFXJDEMNQ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
OFL N/A in BindingDB
Kd: 78 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.200
  • R-Value Work: 0.192
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 42.86 α = 90.00
b = 85.84 β = 90.00
c = 65.07 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-01-23
  • Released Date: 2001-01-23
  • Deposition author(s): Klabunde, T., Petrassi, H.M., Oza, V.B., Kelly, J.W., Sacchettini, J.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4