1BKV

COLLAGEN

Structural Biology Knowledgebase: 1BKV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.277
  • R-Value Work: 0.228

Literature

Macromolecules
Sequence Display for 1BKV

Classification: STRUCTURAL PROTEIN

Total Structure Weight: 8361.06

Macromolecule Entities
Molecule Chains Length Organism Details
T3-785 A, B, C 30 synthetic Details: SYNTHETIC PEPTIDE CONTAINS REGION FROM HUMAN TYPE III COLLAGEN

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ACY
Query on ACY

B, C ACETIC ACID
C2 H4 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
HYP
Query on HYP
A, B, C L-PEPTIDE LINKING C5 H9 N O3 PRO

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.277
  • R-Value Work: 0.228
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 117.09 α = 90.00
b = 15.63 β = 104.46
c = 39.72 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-07-13
  • Released Date: 1999-02-16
  • Deposition author(s): Kramer, R.Z., Bella, J., Mayville, P., Brodsky, B., Berman, H.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4