BINDING OF AN ANTITUMOR DRUG TO DNA. NETROPSIN AND C-G-C-G-A-A-T-T-BRC-G-C-G
DOI:10.2210/pdb6bna/pdb   NDB ID: GDLB05
6BNA
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: DNA
    Structure Weight: 7915.11
    Molecule: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(CBR)P*GP*CP*G)-3')
    Polymer: 1 Type: dna Length: 12
    Chains: A, B
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    NT
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    NT C18 H26 N10 O3
    NETROPSIN
    NT:6BNA
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    CBR
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    CBR C9 H13 Br N3 O7 P DC dnaLinking
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:GDLB05
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Kopka, M.L.,  Yoon, C.,  Goodsell, D.,  Pjura, P.,  Dickerson, R.E.

    Deposition:   1984-08-30
    Release:   1984-10-29
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.21
    R-Value: 0.211 (obs.)
    R-Free: n/a
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 24.27 α = 90.00 
    b = 39.62 β = 90.00 
    c = 63.57 γ = 90.00