Crystal structure of liganded hRXR-alpha/hLXR-beta heterodimer on DNA
DOI:10.2210/pdb4nqa/pdb   NDB ID: NA2799
4NQA
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription Regulator/dna
    Structure Weight: 201037.32
    Molecule: Retinoic acid receptor RXR-alpha
    Polymer: 1 Type: protein Length: 365
    Chains: A, H
    Fragment: UNP residues 98-462
    Organism: Homo sapiens
    Gene Names: NR2B1 Gene View for RXRA
    UniProtKB: Search PDB | P19793   Protein Feature View
    Molecule: Liver X nuclear receptor beta
    Polymer: 2 Type: protein Length: 391
    Chains: B, I
    Fragment: UNP residues 72-461
    Organism: Homo sapiens
    Gene Names: hCG_22944 Gene View for NR1H2
    UniProtKB: Search PDB | F1D8P7   Protein Feature View
    Molecule: Nuclear receptor coactivator 2
    Polymer: 3 Type: protein Length: 13
    Chains: C, D, J, K
    Fragment: peptide (UNP residues 686-698)
    Organism: Homo sapiens
    Gene Names: BHLHE75 SRC2 TIF2 Gene View for NCOA2
    UniProtKB: Search PDB | Q15596   Protein Feature View
    Molecule: 5'-D(*TP*AP*AP*GP*GP*TP*CP*AP*CP*TP*TP*CP*AP*GP*GP*TP*CP*A)-3'
    Polymer: 4 Type: dna Length: 18
    Chains: E, L
    Details: DR4 DNA response element
    Molecule: 5'-D(*TP*AP*TP*GP*AP*CP*CP*TP*GP*AP*AP*GP*TP*GP*AP*CP*CP*T)-3'
    Polymer: 5 Type: dna Length: 18
    Chains: F, M
    Details: DR4 DNA response element
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 3
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human  
    Polymer: 4
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 5
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    965
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    965 C33 H31 Cl F3 N O3
    [3-(3-{[2-chloro-3-(trifluoromethyl)benzyl](2,2- diphenylethyl)amino}propoxy)phenyl]acetic acid
    REA
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    REA C20 H28 O2
    RETINOIC ACID
    ZN
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    ZN Zn
    ZINC ION
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:NA2799
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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