4KZX

Rabbit 40S ribosomal subunit in complex with eIF1.

Structural Biology Knowledgebase: 4KZX SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 7.81 Å
  • R-Value Free: 0.347
  • R-Value Work: 0.347

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4KZX

Classification: RIBOSOME

Total Structure Weight: 1238652.00


Macromolecule Entities
Molecule Chains Length Organism Details
40S ribosomal protein SA A 295 Oryctolagus cuniculus Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S3a B 264 Oryctolagus cuniculus Gene Name(s): LOC100340708 RPS3A Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S2 C 278 Oryctolagus cuniculus Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S3 D 243 Oryctolagus cuniculus Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S4X E 263 Oryctolagus cuniculus Gene Name(s): RPS4X Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S5 F 204 Oryctolagus cuniculus Gene Name(s): RPS5 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S6 G 249 Oryctolagus cuniculus Gene Name(s): LOC100339133
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S7 H 194 Oryctolagus cuniculus Gene Name(s): RPS7 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S8 I 208 Oryctolagus cuniculus Gene Name(s): RPS8 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S Ribosomal protein S9 J 194 Oryctolagus cuniculus Gene Name(s): RPS9 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S10 K 165 Oryctolagus cuniculus Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S11 L 158 Oryctolagus cuniculus Gene Name(s): RPS11 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S12 M 132 Oryctolagus cuniculus Gene Name(s): RPS12 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S13 N 151 Oryctolagus cuniculus Gene Name(s): RPS13 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S14 O 151 Oryctolagus cuniculus Gene Name(s): LOC100337691
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S15 P 145 Oryctolagus cuniculus Gene Name(s): LOC103349305
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S16 Q 146 Oryctolagus cuniculus Gene Name(s): RPS16 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S17 R 135 Oryctolagus cuniculus Gene Name(s): RPS17 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S18 S 152 Oryctolagus cuniculus Gene Name(s): RPS18 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S19 T 145 Oryctolagus cuniculus Gene Name(s): RPS19 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S20 U 119 Oryctolagus cuniculus Gene Name(s): LOC100354063
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S21 V 83 Oryctolagus cuniculus Gene Name(s): RPS21 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S15A W 130 Oryctolagus cuniculus Gene Name(s): RPS15A Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S23 X 143 Oryctolagus cuniculus Mutation: A1M
Gene Name(s): RPS23 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S24 Y 133 Oryctolagus cuniculus Gene Name(s): RPS24 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S25 Z 125 Oryctolagus cuniculus Gene Name(s): RPS25 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S26 a 115 Oryctolagus cuniculus Gene Name(s): RPS26 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S27 b 84 Oryctolagus cuniculus Gene Name(s): RPS27 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S28 c 69 Oryctolagus cuniculus Gene Name(s): RPS28 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S29 d 56 Oryctolagus cuniculus Gene Name(s): LOC100337712
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S30 e 133 Oryctolagus cuniculus Gene Name(s): FAU Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein S27A f 156 Oryctolagus cuniculus Gene Name(s): RPS27A Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
40S ribosomal protein RACK1 g 317 Oryctolagus cuniculus Gene Name(s): GNB2L1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Eukaryotic translation initiation factor 1 l 113 Homo sapiens Gene Name(s): EIF1 Gene View SUI1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
18S ribosomal RNA i 1863 Oryctolagus cuniculus


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 7.81 Å
  • R-Value Free: 0.347
  • R-Value Work: 0.347
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 292.12 α = 90.00
b = 292.12 β = 90.00
c = 477.67 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-05-30
  • Released Date: 2013-07-24
  • Deposition author(s): Lomakin, I.B., Steitz, T.A.

Revision History

  • 2013-09-04
    Type: Citation | Details: Citation update
  • 2013-08-07
    Type: Citation | Details: Citation update