4IIM

Crystal structure of the Second SH3 Domain of ITSN1 bound with a synthetic peptide

Structural Biology Knowledgebase: 4IIM SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.188

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4IIM

Classification: ENDOCYTOSIS

Total Structure Weight: 20092.90

Macromolecule Entities
Molecule Chains Length Organism Details
Intersectin-1 A, B 70 Homo sapiens Gene Name(s): ITSN1 Gene View ITSN SH3D1A
peptide ligand C, D, E 12 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
UNX
Query on UNX

A, B, C, D UNKNOWN ATOM OR ION
X
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.188
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 41.05 α = 90.00
b = 51.39 β = 90.00
c = 69.26 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-12-20
  • Released Date: 2013-01-23
  • Deposition author(s): Dong, A., Guan, X., Huang, H., Wernimont, A., Gu, J., Sidhu, S., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Tong, Y., Structural Genomics Consortium (SGC)

Revision History

No revisions since initial release