4I9I

Crystal structure of tankyrase 1 with compound 4

Structural Biology Knowledgebase: 4I9I SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.286
  • R-Value Work: 0.250

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4I9I

Classification: TRANSFERASE / TRANSFERASE INHIBITOR

Total Structure Weight: 102197.41

Macromolecule Entities
Molecule Chains Length Organism Details
Tankyrase-1 A, B, C, D 217 Homo sapiens EC#: 2.4.2.30 IUBMB
Fragment: UNP residues 1104-1314
Gene Name(s): TNKS Gene View PARP5A PARPL TIN1 TINF1 TNKS1

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
1DY
Query on 1DY

A, B, C, D N-(2-methoxyphenyl)-4-{[3-(4-oxo-3,4-dihydroquinazolin- 2-yl)propanoyl]amino}benzamide
C25 H22 N4 O4
WWKKOAKRYQQEBT-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
ZN
Query on ZN

A, B, C, D ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
1DY N/A in BindingDB
IC50: 8 nM  BindingMOAD
IC50: 8 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.286
  • R-Value Work: 0.250
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 158.62 α = 90.00
b = 77.12 β = 90.00
c = 84.51 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-12-05
  • Released Date: 2013-02-06
  • Deposition author(s): Huang, X.

Revision History

  • 2013-05-22
    Type: Citation | Details: Citation update