C.Esp1396I bound to a 19 base pair DNA duplex
DOI:10.2210/pdb4i8t/pdb   NDB ID: NA2152
4I8T
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription/dna
    Structure Weight: 30689.20
    Molecule: Regulatory protein
    Polymer: 1 Type: protein Length: 82
    Chains: A, B
    Organism: Enterobacter sp. RFL1396
    Gene Name: esp1396IC
    UniProtKB: Protein Feature View | Search PDB | Q8GGH0  
    Molecule: DNA (5'-D(P*TP*GP*TP*TP*GP*AP*CP*TP*AP*TP*AP*AP*TP*CP*AP*CP*AP*CP*A)-3')
    Polymer: 2 Type: dna Length: 19
    Chains: C
    Molecule: DNA (5'-D(P*TP*GP*TP*GP*TP*GP*AP*TP*TP*AP*TP*AP*GP*TP*CP*AP*AP*CP*A)-3')
    Polymer: 3 Type: dna Length: 19
    Chains: D
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Enterobacter sp.   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    3CLC   DNA Bound Tetramer 
    3FYA   R35A Mutant Free Protein 
    3G5G   Native Free Protein 
    3S8Q   DNA Bound Dimer (OL) 
    3UFD   DNA Bound Dimer (OM) 
    4F8D   R46A Mutant Free Protein 
    4FBI   R46A Mutant Free Protein 
    4FN3   S52A Mutant Free Protein 
    4I6R   Native Free Protein (Triclinic) 
    4I6T   T36A Mutant Free Protein 
    4I6U   Y37F Mutant Free Protein 
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:NA2152
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Martin, R.N.A.,  McGeehan, J.E.,  Kneale, G.G.

    Deposition:   2012-12-04
    Release:   2013-09-11
     
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    2013-09-11
    Citation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   3.00
    R-Value: 0.241 (obs.)
    R-Free: 0.293
    Space Group: C 1 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 75.51 α = 90.00 
    b = 60.86 β = 113.47 
    c = 80.35 γ = 90.00