The re-refined crystal structure of the Haloarcula marismortui large ribosomal subunit at 2.4 Angstrom resolution: more complete structure of the L7/L12 and L1 stalk, L5 and LX proteins. This entry contains LX protein and water molecules.
Split Entry
The asymmetric unit for this structure is composed of multiple PDB entries:
4HUB   4I4M  
  Download All Files   

The complete entry has been assigned PDB ID 4V9F and is available for download in PDBx/mmCIF and PDBML/XML formats from the FTP archive at:
Primary Citation
Original Entry Used for Re-refinement

The complete atomic structure of the large ribosomal subunit at 2.4 A resolution.
Ban, N., Nissen, P., Hansen, J., Moore, P.B., Steitz, T.A.
(2000) Science 289: 905
  •   Molecular Description Hide
    Classification: Ribosome
    Structure Weight: 6395.00
    Molecule: 50S ribosomal protein LX
    Polymer: 1 Type: protein Length: 56
    Chains: 6
    Organism: Haloarcula marismortui ATCC 43049
    Gene Names: rpl18a rpl20e rplX rrnAC3115.1
    UniProtKB: Protein Feature View | Search PDB | P14125  
  •   Structure Validation Hide

    Download full validation report    


  • MolProbity Ramachandran Plot

  •   Related Citations in PDB Entry (REMARK 1) Hide
  •   Source Hide
    Polymer: 1
    Scientific Name: Haloarcula marismortui   Taxonomy    
  •   Related PDB Entries Hide
    Identifier Details
    1FFK  Crystal structure of the large ribosomal subunit from Haloarcula marismortui at 2.4 Angstrom resolution. THIS ENTRY 4I4M REFLECTS AN ALTERNATIVE MODELING OF X-RAY DATA R1FFKSF. 
    2QA4  A more complete structure of the the L7/L12 stalk of the Haloarcula marismortui 50S large ribosomal subunit 
    3CC2  The refined crystal structure of the Haloarcula marismortui large ribosomal subunit at 2.4 Angstrom resolution with rRNA Sequence for the 23S rRNA and genome-derived sequences for r-proteins 
    3JSY  N-terminal fragment of ribosomal protein L10 from Methanococcus jannaschii 
  •   External Domain Annotations Hide
  •   Structural Biology Knowledgebase Data Hide
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Composite of PDB entries (4HUB and 4I4M)
  •   MyPDB Personal Annotations Hide
  •   Deposition Summary Hide
    Authors:   Gabdulkhakov, A.

    Deposition:   2012-11-28
    Release:   2013-05-29
    Last Modified (REVDAT):   2014-02-05
  •   Revision History    Hide
    Mouse over text for details
  •   Experimental Details Hide
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.40
    R-Value: 0.166 (obs.)
    R-Free: 0.206
    Space Group: C 2 2 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 211.66 α = 90.00 
    b = 299.67 β = 90.00 
    c = 573.77 γ = 90.00