4HUU

Crystal Structure of H2Db-NPM6I

Structural Biology Knowledgebase: 4HUU SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.191

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4HUU

Classification: IMMUNE SYSTEM

Total Structure Weight: 90920.63

Macromolecule Entities
Molecule Chains Length Organism Details
H-2 class I histocompatibility antigen, D-B alpha chain A, D 281 Mus musculus Gene Name(s): H2-D1
Beta-2-microglobulin B, E 100 Mus musculus Gene Name(s): B2m
NPM6I variant peptide C, F 9 Influenza a virus

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ACT
Query on ACT

B ACETATE ION
C2 H3 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-M
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.231
  • R-Value Work: 0.191
  • Space Group: P 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 83.69 α = 90.00
b = 72.27 β = 103.29
c = 86.83 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-11-04
  • Released Date: 2013-02-27
  • Deposition author(s): Gras, S., Twist, K.A., Rossjohn, J.

Revision History

  • 2013-04-24
    Type: Citation | Details: Citation update
  • 2013-03-27
    Type: Citation | Details: Citation update